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  • Introduction

The Basics

  • The Parameter Tree
  • JSON/YAML Config Files
  • Input/Output Parameters
  • Scan Models
  • Reconstruction Engines
    • Projectional Engines
    • Stochastic Engines
    • Gradient-based Engines

Experimental X-ray Data

  • Loading HDF5 data
  • Working With Large Data
  • Fixing Issues Related to Data (Loading)
  • Partial Coherence
  • Position Refinement
  • Missing Detector Frames
  • Testing different algorithms
  • Using multiple GPUs
  • Working with Data from SOLEIL - the SWING beamline
  • Maximum Likelihood with the wavefield pre-conditioner
  • Working with Data from NanoMAX
  • Working with Data from SoftiMAX
  • Working with Data from CoSAXS

Electron Ptychography Data

  • Working With Electron Data
  • Chaining Multiple Engines
  • Starting From a Previous Reconstruction

Advanced Examples

  • Nearfield Ptychography
  • Modifying an Engine
  • Live visualisation
  • Simulating Data
  • Modified Initial Probe

User Examples

  • How to contribute
  • Template
  • Super resolution
  • Repository
  • Open issue

Index

By Benedikt J.Daurer

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